Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma d regulator | C9Y90_22040 | Not Available | Negative | 4493551 - 4494027 | 18243.9 |
| nad(+) diphosphatase | C9Y90_22045 | Not Available | Positive | 4494122 - 4494895 | 29690.6 |
| uroporphyrinogen decarboxylase | C9Y90_22050 | Not Available | Positive | 4494935 - 4495999 | 39264.5 |
| deoxyribonuclease v | C9Y90_22055 | Not Available | Positive | 4496156 - 4496827 | 24673.9 |
| duf416 family protein | C9Y90_22060 | Not Available | Positive | 4496870 - 4497460 | 22613.9 |
| dna-binding protein hu-alpha | C9Y90_22065 | Not Available | Positive | 4497647 - 4497919 | 9535.51 |
| duf1481 domain-containing protein | C9Y90_22070 | Not Available | Positive | 4497932 - 4498627 | 26352.9 |
| zinc resistance-associated protein | C9Y90_22075 | Not Available | Negative | 4498629 - 4499054 | 15200.3 |
| two-component system sensor histidine kinase zras | C9Y90_22080 | Not Available | Positive | 4499292 - 4500668 | 50520.1 |
| sigma-54-dependent response regulator transcription factor zrar | C9Y90_22085 | Not Available | Positive | 4500665 - 4501990 | 48385.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





