Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | C9Y90_20290 | Not Available | Positive | 4172830 - 4173705 | 33109.9 |
| thymidylate synthase | C9Y90_20295 | Not Available | Positive | 4173712 - 4174506 | 30481.4 |
| prepilin peptidase-dependent protein | C9Y90_20300 | Not Available | Positive | 4174691 - 4175161 | 17894.4 |
| prepilin peptidase-dependent protein | C9Y90_20305 | Not Available | Positive | 4175152 - 4175715 | 20509.6 |
| duf2509 family protein | C9Y90_20310 | Not Available | Positive | 4175712 - 4176119 | 14886.1 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | C9Y90_20315 | Not Available | Positive | 4176104 - 4176427 | 11956.6 |
| recbcd enzyme subunit recc | C9Y90_20320 | Not Available | Positive | 4176440 - 4179808 | 128855.0 |
| pitrilysin | C9Y90_20325 | Not Available | Positive | 4179984 - 4182872 | 107888.0 |
| exodeoxyribonuclease v subunit beta | C9Y90_20330 | Not Available | Positive | 4182865 - 4186407 | 134085.0 |
| exodeoxyribonuclease v subunit alpha | C9Y90_20335 | Not Available | Positive | 4186407 - 4188233 | 66954.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





