Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein esph | C9Y90_20090 | Not Available | Positive | 4130868 - 4131383 | 19508.2 |
| tir chaperone family protein | C9Y90_20095 | Not Available | Negative | 4131602 - 4131961 | 13809.5 |
| t3ss effector protein map | C9Y90_20100 | Not Available | Positive | 4132212 - 4132823 | 22601.1 |
| type iii secretion system lee translocated intimin receptor tir | C9Y90_20105 | Not Available | Positive | 4133270 - 4134886 | 55469.1 |
| type iii secretion system lee chaperone cest | C9Y90_20110 | Not Available | Positive | 4135019 - 4135489 | 17721.9 |
| intimin type epsilon | C9Y90_20115 | Not Available | Positive | 4135550 - 4138396 | 103330.0 |
| type iii secretion system lee inner membrane ring protein escd | C9Y90_20120 | Not Available | Negative | 4138776 - 4139996 | 45226.7 |
| tyea family type iii secretion system gatekeeper subunit | C9Y90_20125 | Not Available | Positive | 4140139 - 4141194 | 39976.0 |
| secretion protein espa | C9Y90_20130 | Not Available | Positive | 4141252 - 4141830 | 20533.2 |
| secretion protein espd | C9Y90_20135 | Not Available | Positive | 4141843 - 4142985 | 39578.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





