Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase dcus | C9Y90_19650 | Not Available | Negative | 4054761 - 4056392 | 60538.4 |
| 4fe-4s mono-cluster protein yjdi | C9Y90_19655 | Not Available | Positive | 4056573 - 4056803 | 8622.41 |
| n-acetyltransferase | C9Y90_19660 | Not Available | Positive | 4056815 - 4057087 | 10469.6 |
| endoribonuclease ghos | C9Y90_19665 | Not Available | Positive | 4057314 - 4057610 | 11468.6 |
| ghot/ortt family toxin | C9Y90_19670 | Not Available | Positive | 4057638 - 4057811 | 6570.41 |
| lysine--trna ligase | C9Y90_19675 | Not Available | Negative | 4057930 - 4059447 | 57887.9 |
| mfs transporter | C9Y90_19680 | Not Available | Negative | 4059684 - 4061141 | 52969.7 |
| lysine decarboxylase cada | C9Y90_19685 | Not Available | Negative | 4061200 - 4063347 | 81264.7 |
| cadaverine/lysine antiporter | C9Y90_19690 | Not Available | Negative | 4063427 - 4064761 | 46667.8 |
| transcriptional regulator | C9Y90_19695 | Not Available | Negative | 4065126 - 4066664 | 57830.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





