Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | C9Y90_19075 | Not Available | Positive | 3938475 - 3939200 | 25971.9 |
| ribosome recycling factor | C9Y90_19080 | Not Available | Positive | 3939492 - 3940049 | 20639.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C9Y90_19085 | Not Available | Positive | 3940141 - 3941337 | 43390.5 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | C9Y90_19090 | Not Available | Positive | 3941526 - 3942284 | 28314.5 |
| phosphatidate cytidylyltransferase | C9Y90_19095 | Not Available | Positive | 3942297 - 3943154 | 31455.6 |
| sigma e protease regulator rsep | C9Y90_19100 | Not Available | Positive | 3943166 - 3944518 | 49040.2 |
| outer membrane protein assembly factor bama | C9Y90_19105 | Not Available | Positive | 3944548 - 3946980 | 90557.5 |
| chaperone protein skp | C9Y90_19110 | Not Available | Positive | 3947102 - 3947587 | 17689.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | C9Y90_19115 | Not Available | Positive | 3947591 - 3948616 | 36026.7 |
| 3-hydroxyacyl-acp dehydratase fabz | C9Y90_19120 | Not Available | Positive | 3948721 - 3949176 | 17034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





