Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | C9Y90_18975 | Not Available | Positive | 3914940 - 3917183 | 82200.5 |
| iron(3+)-hydroxamate import atp-binding protein fhuc | C9Y90_18980 | Not Available | Positive | 3917234 - 3918031 | 28872.2 |
| iron(3+)-hydroxamate-binding protein fhud | C9Y90_18985 | Not Available | Positive | 3918031 - 3918921 | 33000.2 |
| fe(3+)-hydroxamate abc transporter permease fhub | C9Y90_18990 | Not Available | Positive | 3918918 - 3920900 | 70464.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | C9Y90_18995 | Not Available | Negative | 3920935 - 3922215 | 45358.7 |
| h(+)/cl(-) exchange transporter clca | C9Y90_19000 | Not Available | Positive | 3922440 - 3923861 | 50335.0 |
| hypothetical protein | C9Y90_19005 | Not Available | Positive | 3923885 - 3923950 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | C9Y90_19010 | Not Available | Positive | 3923943 - 3924287 | 12101.2 |
| tric cation channel family protein | C9Y90_19015 | Not Available | Negative | 3924334 - 3924957 | 22129.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | C9Y90_19020 | Not Available | Negative | 3924995 - 3925795 | 29368.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





