Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | C9Y90_18875 | Not Available | Positive | 3892709 - 3893119 | 15313.2 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | C9Y90_18880 | Not Available | Positive | 3893092 - 3895236 | 80545.6 |
| ribonucleoside-diphosphate reductase 2 subunit beta | C9Y90_18885 | Not Available | Positive | 3895246 - 3896205 | 36445.1 |
| proline/glycine betaine abc transporter atp-binding protein prov | C9Y90_18890 | Not Available | Positive | 3896560 - 3897762 | 44165.5 |
| proline/glycine betaine abc transporter permease prow | C9Y90_18895 | Not Available | Positive | 3897755 - 3898819 | 37678.1 |
| proline/glycine betaine abc transporter substrate-binding protein prox | C9Y90_18900 | Not Available | Positive | 3898877 - 3899869 | 36084.4 |
| hypothetical protein | C9Y90_18905 | Not Available | Negative | 3899913 - 3900095 | 6977.72 |
| mfs transporter | C9Y90_18910 | Not Available | Positive | 3900161 - 3901345 | 41657.9 |
| branched-chain amino acid abc transporter permease | C9Y90_18915 | Not Available | Positive | 3901469 - 3902206 | 26095.1 |
| l-valine transporter subunit ygah | C9Y90_18920 | Not Available | Positive | 3902196 - 3902531 | 12024.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





