Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator csir | C9Y90_18825 | Not Available | Positive | 3887419 - 3888081 | 24991.3 |
| peptidoglycan-binding protein lysm | C9Y90_18830 | Not Available | Negative | 3888082 - 3888531 | 16036.9 |
| yqae/pmp3 family membrane protein | C9Y90_18835 | Not Available | Negative | 3888615 - 3888773 | 5837.55 |
| transcriptional regulator | C9Y90_18840 | Not Available | Positive | 3888956 - 3889255 | 10596.9 |
| thiosulfate sulfurtransferase ygap | C9Y90_18845 | Not Available | Positive | 3889265 - 3889789 | 18713.0 |
| dna-binding protein stpa | C9Y90_18850 | Not Available | Negative | 3889836 - 3890240 | 15348.4 |
| l-alanine exporter alae | C9Y90_18855 | Not Available | Positive | 3890908 - 3891357 | 16950.0 |
| duf2002 family protein | C9Y90_18860 | Not Available | Negative | 3891394 - 3891738 | 13066.5 |
| duf883 domain-containing protein | C9Y90_18865 | Not Available | Positive | 3891890 - 3892219 | 11847.9 |
| glutaredoxin-like protein nrdh | C9Y90_18870 | Not Available | Positive | 3892467 - 3892712 | 9139.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





