Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ypjd | C9Y90_18710 | Not Available | Positive | 3862874 - 3863665 | 29263.9 |
| duf21 domain-containing protein | C9Y90_18715 | Not Available | Positive | 3863731 - 3864972 | 46353.9 |
| nucleotide exchange factor grpe | C9Y90_18720 | Not Available | Negative | 3865027 - 3865620 | 21799.1 |
| molecular chaperone grpe | C9Y90_18725 | Not Available | Negative | 3865617 - 3865811 | 7202.78 |
| nad(+) kinase | C9Y90_18730 | Not Available | Positive | 3865743 - 3866621 | 32568.3 |
| dna repair protein recn | C9Y90_18735 | Not Available | Positive | 3866707 - 3868368 | 61400.1 |
| outer membrane protein assembly factor bame | C9Y90_18740 | Not Available | Positive | 3868517 - 3868858 | 12302.8 |
| rnfh family protein | C9Y90_18745 | Not Available | Negative | 3868920 - 3869210 | 10790.0 |
| ubiquinone-binding protein | C9Y90_18750 | Not Available | Negative | 3869200 - 3869676 | 17743.7 |
| ssra-binding protein smpb | C9Y90_18755 | Not Available | Positive | 3869808 - 3870290 | 18300.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





