Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Y90_18610 | Not Available | Positive | 3845257 - 3845874 | 22112.6 |
| inositol monophosphatase | C9Y90_18615 | Not Available | Positive | 3845871 - 3846260 | 14652.2 |
| chaperone protein clpb | C9Y90_18620 | Not Available | Negative | 3846624 - 3849197 | 95590.8 |
| polyphenol oxidase | C9Y90_18625 | Not Available | Negative | 3849327 - 3850058 | 26461.4 |
| ribosomal large subunit pseudouridine synthase d | C9Y90_18630 | Not Available | Negative | 3850055 - 3851035 | 37123.9 |
| outer membrane protein assembly factor bamd | C9Y90_18635 | Not Available | Positive | 3851170 - 3851907 | 27826.9 |
| ribosome-associated inhibitor a | C9Y90_18640 | Not Available | Positive | 3852178 - 3852519 | 12785.3 |
| hypothetical protein | C9Y90_18645 | Not Available | Positive | 3852623 - 3852670 | 1912.35 |
| bifunctional chorismate mutase/prephenate dehydratase | C9Y90_18650 | Not Available | Positive | 3852769 - 3853929 | 43085.8 |
| bifunctional chorismate mutase/prephenate dehydrogenase | C9Y90_18655 | Not Available | Negative | 3853972 - 3855093 | 42016.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





