Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Y90_17500 | Not Available | Positive | 3641391 - 3641861 | 17653.0 |
| hypothetical protein | C9Y90_17505 | Not Available | Negative | 3641867 - 3642262 | 15140.6 |
| dna-binding protein | C9Y90_17510 | Not Available | Negative | 3642312 - 3642554 | 9755.97 |
| hypothetical protein | C9Y90_17520 | Not Available | Negative | 3642968 - 3643258 | 11981.4 |
| alpa family transcriptional regulator | C9Y90_17525 | Not Available | Negative | 3643340 - 3643558 | 8400.01 |
| insulinase family protein | C9Y90_17530 | Not Available | Negative | 3644140 - 3646935 | 104662.0 |
| tonb-dependent receptor | C9Y90_17535 | Not Available | Negative | 3646980 - 3649352 | 89177.3 |
| abc transporter atp-binding protein/permease | C9Y90_17540 | Not Available | Negative | 3649390 - 3651075 | 64977.5 |
| anaerobic sulfatase maturase | C9Y90_17550 | Not Available | Negative | 3651364 - 3652521 | 44516.2 |
| transcriptional regulator ydeo | C9Y90_17560 | Not Available | Negative | 3654656 - 3655417 | 28815.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





