Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar type iii secretion system protein flio | C9Y90_17265 | Not Available | Positive | 3601700 - 3602065 | 12694.7 |
| flagellar biosynthetic protein flip | C9Y90_17270 | Not Available | Positive | 3602065 - 3602802 | 26988.1 |
| flagellar biosynthetic protein fliq | C9Y90_17275 | Not Available | Positive | 3602812 - 3603081 | 9632.54 |
| flagellar type iii secretion system protein flir | C9Y90_17280 | Not Available | Positive | 3603090 - 3603875 | 28539.4 |
| transcriptional regulator rcsa | C9Y90_17285 | Not Available | Positive | 3604165 - 3604788 | 23522.8 |
| protein dsrb | C9Y90_17290 | Not Available | Negative | 3604832 - 3605074 | 9071.8 |
| stress-induced protein yodd | C9Y90_17300 | Not Available | Positive | 3605183 - 3605410 | 8579.66 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | C9Y90_17305 | Not Available | Positive | 3605708 - 3606523 | 30457.9 |
| cellulose biosynthesis regulator yedq | C9Y90_17310 | Not Available | Negative | 3606520 - 3608214 | 64197.4 |
| duf2158 domain-containing protein | C9Y90_17315 | Not Available | Negative | 3608385 - 3608567 | 6678.85 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





