Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane transport permease ybhs | C9Y90_00450 | Not Available | Negative | 87441 - 88574 | 42062.4 |
| abc transporter atp-binding protein | C9Y90_00455 | Not Available | Negative | 88567 - 90303 | 63163.3 |
| secretion protein hlyd | C9Y90_00460 | Not Available | Negative | 90296 - 91291 | 36286.7 |
| dna-binding transcriptional regulator cecr | C9Y90_00465 | Not Available | Negative | 91294 - 91965 | 25018.1 |
| atp-dependent rna helicase rhle | C9Y90_00470 | Not Available | Positive | 92194 - 93558 | 49992.4 |
| nadar family protein | C9Y90_00475 | Not Available | Negative | 93790 - 94272 | 18673.3 |
| atp-dependent dna helicase ding | C9Y90_00480 | Not Available | Positive | 94392 - 96542 | 81562.1 |
| dna-binding protein ybib | C9Y90_00485 | Not Available | Positive | 96570 - 97532 | 35050.7 |
| malate/lactate/ureidoglycolate dehydrogenase | C9Y90_00490 | Not Available | Positive | 97673 - 98758 | 38911.4 |
| duf1471 domain-containing protein | C9Y90_00495 | Not Available | Negative | 98987 - 99247 | 8568.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





