Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | C9Y90_16845 | Not Available | Negative | 3525325 - 3526311 | 36085.3 |
| mannitol dehydrogenase family protein | C9Y90_16850 | Not Available | Negative | 3526429 - 3527895 | 54120.0 |
| elongation factor p-like protein yeip | C9Y90_16855 | Not Available | Negative | 3528118 - 3528690 | 21533.9 |
| ykgj family cysteine cluster protein | C9Y90_16860 | Not Available | Positive | 3528845 - 3529099 | 8967.02 |
| sugar efflux transporter setb | C9Y90_16865 | Not Available | Negative | 3529096 - 3530277 | 42777.6 |
| fused pts fructose transporter subunit iia/hpr protein | C9Y90_16870 | Not Available | Positive | 3530645 - 3531775 | 39735.3 |
| 1-phosphofructokinase | C9Y90_16875 | Not Available | Positive | 3531775 - 3532713 | 33757.6 |
| pts fructose transporter subunit iibc | C9Y90_16880 | Not Available | Positive | 3532730 - 3534421 | 57478.6 |
| pseudouridine kinase | C9Y90_16885 | Not Available | Positive | 3534845 - 3535786 | 33687.0 |
| pseudouridine-5'-phosphate glycosidase | C9Y90_16890 | Not Available | Positive | 3535774 - 3536712 | 32922.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





