Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator ilvy | C9Y90_16215 | Not Available | Negative | 3403864 - 3404757 | 33155.2 |
| ketol-acid reductoisomerase | C9Y90_16220 | Not Available | Positive | 3404907 - 3406382 | 54072.2 |
| peptidylprolyl isomerase c | C9Y90_16225 | Not Available | Negative | 3406469 - 3406750 | 10232.6 |
| hypothetical protein | C9Y90_16230 | Not Available | Negative | 3406949 - 3407398 | 16868.5 |
| atp-dependent dna helicase rep | C9Y90_16235 | Not Available | Positive | 3407615 - 3409636 | 77059.6 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | C9Y90_16240 | Not Available | Negative | 3409683 - 3411167 | 54888.5 |
| atp-dependent rna helicase rhlb | C9Y90_16245 | Not Available | Negative | 3411301 - 3412566 | 47128.7 |
| thiol reductase thioredoxin | C9Y90_16250 | Not Available | Positive | 3412697 - 3413026 | 11807.2 |
| rho operon leader peptide rhol | C9Y90_16255 | Not Available | Positive | 3413167 - 3413268 | 3750.4 |
| transcription termination factor rho | C9Y90_16260 | Not Available | Positive | 3413353 - 3414612 | 47007.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





