Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Y90_16165 | Not Available | Negative | 3395680 - 3395835 | 6027.24 |
| hypothetical protein | C9Y90_16170 | Not Available | Negative | 3395930 - 3396424 | 19018.5 |
| hcp1 family type vi secretion system effector | C9Y90_16175 | Not Available | Negative | 3396421 - 3397599 | 44306.9 |
| n-acetyltransferase | C9Y90_16180 | Not Available | Negative | 3397836 - 3398324 | 18794.6 |
| oxidoreductase | C9Y90_16185 | Not Available | Positive | 3398656 - 3399693 | 38767.1 |
| pirin family protein | C9Y90_16190 | Not Available | Positive | 3399816 - 3400511 | 26307.9 |
| hth-type transcriptional regulator gntr | C9Y90_16195 | Not Available | Positive | 3400735 - 3401730 | 36371.2 |
| gluconokinase | C9Y90_16200 | Not Available | Positive | 3401869 - 3402396 | 19544.4 |
| gluconate transporter | C9Y90_16205 | Not Available | Positive | 3402400 - 3402850 | 15676.3 |
| threonine ammonia-lyase, biosynthetic | C9Y90_16210 | Not Available | Positive | 3402851 - 3403812 | 35583.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





