Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pheromone autoinducer 2 transporter | C9Y90_16015 | Not Available | Negative | 3367307 - 3368356 | 38524.8 |
| mfs transporter | C9Y90_16020 | Not Available | Positive | 3368488 - 3369711 | 42398.6 |
| protein dcrb | C9Y90_16025 | Not Available | Negative | 3369715 - 3370272 | 19788.7 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | C9Y90_16030 | Not Available | Negative | 3370345 - 3371010 | 25270.3 |
| sulfurtransferase tusa | C9Y90_16035 | Not Available | Positive | 3371231 - 3371476 | 9095.09 |
| zinc/cadmium/mercury/lead-transporting atpase | C9Y90_16040 | Not Available | Negative | 3371578 - 3373776 | 76728.2 |
| lysoplasmalogenase | C9Y90_16045 | Not Available | Negative | 3373850 - 3374476 | 23791.9 |
| duf2500 domain-containing protein | C9Y90_16050 | Not Available | Positive | 3374617 - 3374976 | 13515.3 |
| duf1145 family protein | C9Y90_16055 | Not Available | Negative | 3374979 - 3375248 | 10280.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | C9Y90_16060 | Not Available | Negative | 3375238 - 3375834 | 21704.9 |
Pathways
977 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





