Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C9Y90_15965 | Not Available | Positive | 3359284 - 3360408 | 41112.2 |
| type ii toxin-antitoxin system hica family toxin | C9Y90_15970 | Not Available | Positive | 3360481 - 3360756 | 10210.5 |
| type ii toxin-antitoxin system hicb family antitoxin | C9Y90_15975 | Not Available | Positive | 3360753 - 3361112 | 13403.0 |
| nickel-responsive transcriptional regulator nikr | C9Y90_15980 | Not Available | Negative | 3361232 - 3361633 | 15094.7 |
| nickel import atp-binding protein nike | C9Y90_15985 | Not Available | Negative | 3361639 - 3362445 | 29648.4 |
| nickel import atp-binding protein nikd | C9Y90_15990 | Not Available | Negative | 3362442 - 3363206 | 26839.2 |
| nickel abc transporter permease subunit nikc | C9Y90_15995 | Not Available | Negative | 3363206 - 3364039 | 30363.8 |
| nickel abc transporter permease subunit nikb | C9Y90_16000 | Not Available | Negative | 3364036 - 3364980 | 35250.3 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | C9Y90_16005 | Not Available | Negative | 3364980 - 3366554 | 58791.3 |
| 4'-phosphopantetheinyl transferase | C9Y90_16010 | Not Available | Negative | 3366665 - 3367252 | 21769.0 |
Pathways
932 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





