Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mltr family transcriptional regulator | C9Y90_15745 | Not Available | Negative | 3310875 - 3311462 | 22019.4 |
| mannitol-1-phosphate 5-dehydrogenase | C9Y90_15750 | Not Available | Negative | 3311462 - 3312610 | 41141.5 |
| pts mannitol transporter subunit iicba | C9Y90_15755 | Not Available | Negative | 3312840 - 3314753 | 68034.5 |
| duf3302 domain-containing protein | C9Y90_15760 | Not Available | Positive | 3315290 - 3315652 | 13882.8 |
| hlyd family secretion protein | C9Y90_15765 | Not Available | Positive | 3315655 - 3316791 | 42020.8 |
| hypothetical protein | C9Y90_15770 | Not Available | Negative | 3317251 - 3317688 | 16094.6 |
| type iv secretion protein rhs | C9Y90_15775 | Not Available | Negative | 3317777 - 3318070 | 10737.6 |
| type iv secretion protein rhs | C9Y90_15780 | Not Available | Negative | 3318055 - 3318174 | 4316.13 |
| sel1 repeat family protein | C9Y90_15785 | Not Available | Negative | 3318395 - 3318856 | 18067.7 |
| arac family transcriptional regulator | C9Y90_15795 | Not Available | Positive | 3320215 - 3321039 | 31455.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





