Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide 3-alpha-galactosyltransferase | C9Y90_15595 | Not Available | Positive | 3279261 - 3280277 | 38784.8 |
| lipopolysaccharide 1,2-glucosyltransferase | C9Y90_15600 | Not Available | Positive | 3280294 - 3281289 | 38518.8 |
| lipopolysaccharide core heptose(ii) kinase rfay | C9Y90_15605 | Not Available | Positive | 3281299 - 3281991 | 27023.9 |
| udp-galactose--(galactosyl) lps alpha1,2-galactosyltransferase | C9Y90_15610 | Not Available | Positive | 3282017 - 3283042 | 39332.8 |
| glycosyltransferase family 2 protein | C9Y90_15615 | Not Available | Positive | 3283127 - 3284110 | 38781.4 |
| ligase | C9Y90_15620 | Not Available | Positive | 3284156 - 3285409 | 46831.4 |
| lipopolysaccharide heptosyltransferase rfac | C9Y90_15625 | Not Available | Negative | 3285479 - 3286450 | 35996.2 |
| adp-heptose--lps heptosyltransferase | C9Y90_15630 | Not Available | Negative | 3286454 - 3287500 | 39030.4 |
| adp-glyceromanno-heptose 6-epimerase | C9Y90_15635 | Not Available | Negative | 3287510 - 3288442 | 34895.0 |
| 2-amino-3-ketobutyrate coa ligase | C9Y90_15640 | Not Available | Positive | 3288656 - 3289852 | 43119.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





