Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | C9Y90_15545 | Not Available | Negative | 3270452 - 3271672 | 43440.7 |
| jab domain-containing protein | C9Y90_15550 | Not Available | Positive | 3271844 - 3272512 | 25275.9 |
| 50s ribosomal protein l28 | C9Y90_15555 | Not Available | Positive | 3272729 - 3272965 | 9007.02 |
| 50s ribosomal protein l33 | C9Y90_15560 | Not Available | Positive | 3272986 - 3273153 | 6371.94 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | C9Y90_15565 | Not Available | Positive | 3273251 - 3274060 | 30291.8 |
| pantetheine-phosphate adenylyltransferase | C9Y90_15570 | Not Available | Negative | 3274099 - 3274578 | 17837.7 |
| 3-deoxy-d-manno-octulosonic acid transferase | C9Y90_15575 | Not Available | Negative | 3274586 - 3275863 | 47252.8 |
| lipopolysaccharide core heptosyltransferase rfaq | C9Y90_15580 | Not Available | Positive | 3276276 - 3277334 | 39448.9 |
| glycosyltransferase family 1 protein | C9Y90_15585 | Not Available | Positive | 3277331 - 3278455 | 42530.6 |
| lipopolysaccharide core heptose(i) kinase rfap | C9Y90_15590 | Not Available | Positive | 3278448 - 3279245 | 31053.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





