Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit omega | C9Y90_15495 | Not Available | Negative | 3262019 - 3262294 | 10237.2 |
| guanylate kinase | C9Y90_15500 | Not Available | Negative | 3262349 - 3262972 | 23594.1 |
| nad-dependent dna ligase ligb | C9Y90_15505 | Not Available | Positive | 3263230 - 3264912 | 63357.1 |
| trimeric intracellular cation channel family protein | C9Y90_15510 | Not Available | Negative | 3264909 - 3265526 | 22049.8 |
| dna damage-inducible protein d | C9Y90_15515 | Not Available | Negative | 3265818 - 3266642 | 31163.7 |
| yicc family protein | C9Y90_15520 | Not Available | Negative | 3266863 - 3267726 | 33160.9 |
| ribonuclease ph | C9Y90_15525 | Not Available | Positive | 3267853 - 3268569 | 25327.4 |
| orotate phosphoribosyltransferase | C9Y90_15530 | Not Available | Positive | 3268635 - 3269276 | 23496.3 |
| nucleoid occlusion factor slma | C9Y90_15535 | Not Available | Negative | 3269313 - 3269909 | 22837.7 |
| dutp diphosphatase | C9Y90_15540 | Not Available | Negative | 3270016 - 3270471 | 16157.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





