Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexose phosphate transporter | C9Y90_15395 | Not Available | Positive | 3236549 - 3237940 | 50609.6 |
| adenine deaminase | C9Y90_15400 | Not Available | Negative | 3237985 - 3239751 | 63713.1 |
| adenine permease adeq | C9Y90_15405 | Not Available | Positive | 3239926 - 3241260 | 46954.6 |
| duf1198 domain-containing protein | C9Y90_15410 | Not Available | Positive | 3241313 - 3241765 | 17220.1 |
| purine ribonucleoside efflux pump nepi | C9Y90_15415 | Not Available | Positive | 3241976 - 3243166 | 41834.5 |
| hypothetical protein | C9Y90_15420 | Not Available | Negative | 3243207 - 3243500 | 11070.3 |
| lipoprotein nlpa | C9Y90_15425 | Not Available | Positive | 3243722 - 3244540 | 29388.2 |
| dmt family transporter | C9Y90_15430 | Not Available | Negative | 3244544 - 3245467 | 33085.3 |
| sugar efflux transporter setb | C9Y90_15435 | Not Available | Negative | 3245578 - 3246762 | 43466.0 |
| cytoplasmic protein | C9Y90_15440 | Not Available | Negative | 3247150 - 3247290 | 5374.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





