Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate/thiosulfate import atp-binding protein cysa | C9Y90_15245 | Not Available | Negative | 3206671 - 3207768 | 41061.4 |
| sulfate abc transporter permease | C9Y90_15250 | Not Available | Negative | 3207758 - 3208633 | 32539.6 |
| sulfate abc transporter permease | C9Y90_15255 | Not Available | Negative | 3208633 - 3209466 | 30293.6 |
| sulfate abc transporter substrate-binding protein | C9Y90_15260 | Not Available | Negative | 3209466 - 3210482 | 37616.6 |
| sdr family oxidoreductase ucpa | C9Y90_15265 | Not Available | Negative | 3210786 - 3211577 | 27879.7 |
| hth-type transcriptional regulator murr | C9Y90_15270 | Not Available | Negative | 3211706 - 3212563 | 31366.9 |
| n-acetylmuramic acid 6-phosphate etherase | C9Y90_15275 | Not Available | Positive | 3212727 - 3213623 | 31127.8 |
| pts n-acetylmuramic acid transporter subunits iibc | C9Y90_15280 | Not Available | Positive | 3213627 - 3215051 | 49771.0 |
| penicillin binding protein pbp4b | C9Y90_15285 | Not Available | Positive | 3215056 - 3216360 | 47658.0 |
| deferrochelatase/peroxidase | C9Y90_15290 | Not Available | Negative | 3216418 - 3217317 | 33086.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





