Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | C9Y90_15045 | Not Available | Positive | 3168435 - 3168710 | 10210.5 |
| duf2545 family protein | C9Y90_15050 | Not Available | Negative | 3168787 - 3169029 | 8923.5 |
| lipid a biosynthesis palmitoleoyltransferase | C9Y90_15055 | Not Available | Positive | 3169382 - 3170302 | 35495.5 |
| membrane protein ypdk | C9Y90_15060 | Not Available | Positive | 3170658 - 3170729 | 2704.57 |
| glutamate--pyruvate aminotransferase alac | C9Y90_15065 | Not Available | Negative | 3170794 - 3172032 | 46218.8 |
| sensor histidine kinase | C9Y90_15070 | Not Available | Positive | 3172409 - 3174106 | 62661.3 |
| response regulator transcription factor | C9Y90_15075 | Not Available | Positive | 3174121 - 3174855 | 28722.6 |
| arac family transcriptional regulator | C9Y90_15080 | Not Available | Positive | 3174868 - 3175725 | 32416.5 |
| phosphoenolpyruvate--protein phosphotransferase | C9Y90_15085 | Not Available | Negative | 3175728 - 3178223 | 92189.3 |
| aminopeptidase | C9Y90_15090 | Not Available | Negative | 3178248 - 3179285 | 37457.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





