Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 3136401 - 3136476 | Not Available |
| dna methylase | C9Y90_14835 | Not Available | Negative | 3136517 - 3136669 | 5597.69 |
| hypothetical protein | C9Y90_14840 | Not Available | Positive | 3136684 - 3136929 | 9657.71 |
| antitermination protein | C9Y90_14845 | Not Available | Negative | 3136918 - 3137352 | 16447.0 |
| protein ninh | C9Y90_14850 | Not Available | Negative | 3137345 - 3137539 | 7266.74 |
| recombination protein ning | C9Y90_14855 | Not Available | Negative | 3137536 - 3138141 | 23832.5 |
| dna-binding protein | C9Y90_14860 | Not Available | Negative | 3138141 - 3138863 | 26780.4 |
| phage antirepressor ant | C9Y90_14865 | Not Available | Negative | 3138938 - 3139672 | 28233.6 |
| nine family protein | C9Y90_14875 | Not Available | Negative | 3139947 - 3140129 | 7541.32 |
| recombination protein ninb | C9Y90_14880 | Not Available | Negative | 3140126 - 3140536 | 15576.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





