Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Y90_14570 | Not Available | Positive | 3077011 - 3077352 | 12553.0 |
| yiab family inner membrane protein | C9Y90_14575 | Not Available | Positive | 3077398 - 3077835 | 16123.6 |
| hypothetical protein | C9Y90_14585 | Not Available | Positive | 3079047 - 3079346 | 11306.8 |
| glycine--trna ligase subunit alpha | C9Y90_14590 | Not Available | Positive | 3079441 - 3080352 | 34718.2 |
| glycine--trna ligase subunit beta | C9Y90_14595 | Not Available | Positive | 3080362 - 3082431 | 76831.2 |
| type i toxin-antitoxin system toxin hoka | C9Y90_14600 | Not Available | Positive | 3082757 - 3082909 | 5799.3 |
| cold-shock protein | C9Y90_14605 | Not Available | Negative | 3083097 - 3083309 | 7403.66 |
| hth-type transcriptional regulator | C9Y90_14610 | Not Available | Negative | 3083590 - 3083880 | 11033.5 |
| duf3053 domain-containing protein | C9Y90_14615 | Not Available | Positive | 3084314 - 3085024 | 25678.5 |
| glyoxylate/hydroxypyruvate reductase ghrb | C9Y90_14620 | Not Available | Negative | 3085074 - 3086048 | 35398.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





