Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mipa/ompv family protein | C9Y90_14460 | Not Available | Positive | 3052980 - 3053720 | 27358.9 |
| l-ribulose-5-phosphate 4-epimerase sgbe | C9Y90_14470 | Not Available | Negative | 3054067 - 3054762 | 25562.3 |
| l-ribulose-5-phosphate 3-epimerase | C9Y90_14475 | Not Available | Negative | 3054756 - 3055616 | 32513.0 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | C9Y90_14480 | Not Available | Negative | 3055609 - 3056271 | 23534.2 |
| carbohydrate kinase | C9Y90_14485 | Not Available | Negative | 3056268 - 3057764 | 55217.1 |
| trap transporter substrate-binding protein | C9Y90_14490 | Not Available | Negative | 3057768 - 3058754 | 36003.1 |
| 2,3-diketo-l-gulonate transporter large permease yian | C9Y90_14495 | Not Available | Negative | 3058767 - 3060044 | 45367.0 |
| 2,3-diketo-l-gulonate trap transporter permease | C9Y90_14500 | Not Available | Negative | 3060047 - 3060520 | 17516.9 |
| yhch/yjgk/yial family protein | C9Y90_14505 | Not Available | Negative | 3060638 - 3061105 | 17559.1 |
| 3-dehydro-l-gulonate 2-dehydrogenase | C9Y90_14510 | Not Available | Negative | 3061117 - 3062115 | 36588.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





