Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Y90_14405 | Not Available | Negative | 3037900 - 3038469 | 21923.5 |
| rhs repeat protein | C9Y90_14410 | Not Available | Negative | 3038466 - 3042665 | 158290.0 |
| glutathione s-transferase | C9Y90_14415 | Not Available | Positive | 3042894 - 3043502 | 22546.3 |
| l-seryl-trna(sec) selenium transferase | C9Y90_14420 | Not Available | Positive | 3043600 - 3044991 | 50610.2 |
| selenocysteinyl-trna-specific translation elongation factor selb | C9Y90_14425 | Not Available | Positive | 3044988 - 3046832 | 68895.6 |
| l-threonine dehydrogenase | C9Y90_14430 | Not Available | Positive | 3047021 - 3048172 | 40397.7 |
| aldehyde dehydrogenase | C9Y90_14435 | Not Available | Positive | 3048337 - 3049875 | 56339.5 |
| duf3302 domain-containing protein | C9Y90_14445 | Not Available | Positive | 3050420 - 3050743 | 12404.2 |
| hlyd family secretion protein | C9Y90_14450 | Not Available | Positive | 3050749 - 3051885 | 41773.5 |
| lysr family transcriptional regulator | C9Y90_14455 | Not Available | Negative | 3051882 - 3052856 | 37315.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





