Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen phosphorylase | C9Y90_14355 | Not Available | Negative | 3024479 - 3026926 | 93177.7 |
| glycogen synthase glga | C9Y90_14360 | Not Available | Negative | 3026945 - 3028378 | 52825.4 |
| glucose-1-phosphate adenylyltransferase | C9Y90_14365 | Not Available | Negative | 3028378 - 3029673 | 48700.4 |
| glycogen debranching protein glgx | C9Y90_14370 | Not Available | Negative | 3029691 - 3031664 | 73638.6 |
| 1,4-alpha-glucan branching enzyme | C9Y90_14375 | Not Available | Negative | 3031661 - 3033847 | 84341.4 |
| aspartate-semialdehyde dehydrogenase | C9Y90_14380 | Not Available | Negative | 3034120 - 3035223 | 40020.2 |
| naat family transporter yhgn | C9Y90_14385 | Not Available | Positive | 3035415 - 3036008 | 21491.9 |
| gluconate transporter | C9Y90_14390 | Not Available | Negative | 3036065 - 3036961 | 30888.8 |
| is3 family transposase | C9Y90_14395 | Not Available | Positive | 3036962 - 3037103 | 5520.29 |
| hypothetical protein | C9Y90_14400 | Not Available | Negative | 3037430 - 3037705 | 10418.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





