Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp/imp nucleotidase | C9Y90_14200 | Not Available | Positive | 2985788 - 2986456 | 25400.2 |
| ribosome-associated heat shock protein hsp15 | C9Y90_14205 | Not Available | Positive | 2986467 - 2986868 | 15514.8 |
| redox-regulated molecular chaperone hsp33 | C9Y90_14210 | Not Available | Positive | 2986893 - 2987771 | 32522.3 |
| duf4153 domain-containing protein | C9Y90_14215 | Not Available | Negative | 2987906 - 2989630 | 64446.7 |
| phosphoenolpyruvate carboxykinase (atp) | C9Y90_14220 | Not Available | Positive | 2990009 - 2991631 | 59646.7 |
| two-component sensor histidine kinase | C9Y90_14225 | Not Available | Negative | 2991707 - 2993059 | 50337.1 |
| two-component system response regulator ompr | C9Y90_14230 | Not Available | Negative | 2993056 - 2993775 | 27355.3 |
| transcription elongation factor greb | C9Y90_14235 | Not Available | Positive | 2993967 - 2994479 | 19940.8 |
| rna-binding transcriptional accessory protein | C9Y90_14240 | Not Available | Positive | 2994576 - 2996897 | 85066.6 |
| ferrous iron transporter a | C9Y90_14245 | Not Available | Positive | 2997335 - 2997562 | 8371.31 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





