Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | C9Y90_14150 | Not Available | Negative | 2974518 - 2975606 | 38899.3 |
| shikimate kinase | C9Y90_14155 | Not Available | Negative | 2975663 - 2976184 | 19539.2 |
| dna transporter hofq | C9Y90_14160 | Not Available | Negative | 2976585 - 2977823 | 44776.9 |
| duf2531 family protein | C9Y90_14165 | Not Available | Negative | 2977735 - 2978139 | 15052.0 |
| dna utilization protein hofo | C9Y90_14170 | Not Available | Negative | 2978129 - 2978569 | 16806.0 |
| dna utilization protein hofn | C9Y90_14175 | Not Available | Negative | 2978553 - 2979092 | 20850.2 |
| dna utilization protein hofm | C9Y90_14180 | Not Available | Negative | 2979092 - 2979871 | 29028.9 |
| carboxypeptidase/penicillin-binding protein 1a | C9Y90_14185 | Not Available | Positive | 2979991 - 2982543 | 93615.4 |
| adp compounds hydrolase nude | C9Y90_14190 | Not Available | Negative | 2982708 - 2983268 | 21154.4 |
| intracellular growth attenuator protein igaa | C9Y90_14195 | Not Available | Positive | 2983588 - 2985723 | 79504.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





