Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | C9Y90_14050 | Not Available | Positive | 2954968 - 2956341 | 49954.4 |
| duf4223 domain-containing protein | C9Y90_14055 | Not Available | Positive | 2956588 - 2956755 | 5819.16 |
| amino acid permease | C9Y90_14060 | Not Available | Positive | 2956999 - 2958387 | 49375.4 |
| fructoselysine 6-phosphate deglycase | C9Y90_14065 | Not Available | Positive | 2958408 - 2959430 | 38567.3 |
| fructoselysine 3-epimerase | C9Y90_14070 | Not Available | Positive | 2959480 - 2960310 | 31255.8 |
| fructoselysine 6-kinase | C9Y90_14075 | Not Available | Positive | 2960307 - 2961092 | 28319.3 |
| transcriptional regulator | C9Y90_14080 | Not Available | Positive | 2961192 - 2961923 | 27836.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | C9Y90_14085 | Not Available | Negative | 2962075 - 2963160 | 38601.7 |
| hypothetical protein | C9Y90_14090 | Not Available | Negative | 2963172 - 2964476 | 46447.2 |
| duf2620 domain-containing protein | C9Y90_14095 | Not Available | Negative | 2964488 - 2964841 | 12463.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





