Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | C9Y90_13895 | Not Available | Negative | 2928180 - 2928468 | 10448.2 |
| elongation factor g | C9Y90_13900 | Not Available | Negative | 2928539 - 2930653 | 77585.8 |
| 30s ribosomal protein s7 | C9Y90_13905 | Not Available | Negative | 2930750 - 2931220 | 17605.4 |
| 30s ribosomal protein s12 | C9Y90_13910 | Not Available | Negative | 2931317 - 2931691 | 13737.9 |
| sulfurtransferase complex subunit tusb | C9Y90_13915 | Not Available | Negative | 2931817 - 2932104 | 10692.9 |
| sulfurtransferase complex subunit tusc | C9Y90_13920 | Not Available | Negative | 2932112 - 2932471 | 13035.7 |
| sulfurtransferase complex subunit tusd | C9Y90_13925 | Not Available | Negative | 2932471 - 2932857 | 13653.1 |
| transcriptional regulator | C9Y90_13930 | Not Available | Negative | 2932857 - 2933579 | 26822.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | C9Y90_13935 | Not Available | Negative | 2933746 - 2934558 | 28913.4 |
| protein slyx | C9Y90_13940 | Not Available | Positive | 2934779 - 2934997 | 8214.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





