Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class b acid phosphatase | C9Y90_13625 | Not Available | Negative | 2865437 - 2866150 | 26133.0 |
| aromatic amino acid transaminase | C9Y90_13635 | Not Available | Negative | 2867277 - 2868470 | 43524.2 |
| alanine racemase biosynthetic | C9Y90_13640 | Not Available | Negative | 2868723 - 2869802 | 39155.2 |
| replicative dna helicase dnab | C9Y90_13645 | Not Available | Negative | 2869855 - 2871270 | 52393.1 |
| quinone oxidoreductase | C9Y90_13650 | Not Available | Positive | 2871353 - 2872336 | 35153.1 |
| envelope stress response protein pspg | C9Y90_13655 | Not Available | Negative | 2872502 - 2872744 | 9024.0 |
| trna dihydrouridine(20/20a) synthase dusa | C9Y90_13660 | Not Available | Negative | 2872878 - 2873915 | 38470.1 |
| duf2713 domain-containing protein | C9Y90_13665 | Not Available | Negative | 2874278 - 2874985 | 26674.2 |
| hypothetical protein | C9Y90_13670 | Not Available | Negative | 2875009 - 2875263 | 9749.9 |
| zinc uptake transcriptional repressor zur | C9Y90_13675 | Not Available | Positive | 2875581 - 2876096 | 19255.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





