Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter | C9Y90_13575 | Not Available | Negative | 2853934 - 2855583 | 60553.6 |
| guanine/hypoxanthine permease ghxp | C9Y90_13580 | Not Available | Negative | 2855735 - 2857084 | 45714.4 |
| redox-sensitive transcriptional activator soxr | C9Y90_13585 | Not Available | Negative | 2857630 - 2858094 | 17150.7 |
| regulatory protein soxs | C9Y90_13590 | Not Available | Positive | 2858180 - 2858503 | 12911.6 |
| eal domain-containing protein | C9Y90_13595 | Not Available | Negative | 2858506 - 2860092 | 60645.6 |
| hypothetical protein | C9Y90_13600 | Not Available | Positive | 2860522 - 2860803 | 10304.0 |
| single-stranded dna-binding protein ssb1 | C9Y90_13605 | Not Available | Negative | 2860902 - 2861438 | 18976.1 |
| excinuclease abc subunit uvra | C9Y90_13610 | Not Available | Positive | 2861693 - 2864515 | 103912.0 |
| mmcq/yjbr family dna-binding protein | C9Y90_13615 | Not Available | Negative | 2864550 - 2864906 | 13520.2 |
| thiamine phosphate synthase | C9Y90_13620 | Not Available | Negative | 2864910 - 2865326 | 15670.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





