Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | C9Y90_13470 | Not Available | Positive | 2827544 - 2828239 | 26087.6 |
| allose kinase | C9Y90_13475 | Not Available | Positive | 2828223 - 2829152 | 33688.7 |
| alkyl/aryl-sulfatase | C9Y90_13480 | Not Available | Positive | 2829425 - 2831410 | 73223.9 |
| hypothetical protein | C9Y90_13485 | Not Available | Positive | 2831619 - 2831894 | 10257.1 |
| multidrug efflux transporter periplasmic adaptor subunit mdtn | C9Y90_13490 | Not Available | Positive | 2831913 - 2832944 | 36940.3 |
| multidrug efflux transporter permease subunit mdto | C9Y90_13495 | Not Available | Positive | 2832944 - 2834986 | 75866.7 |
| multidrug efflux transporter outer membrane subunit mdtp | C9Y90_13500 | Not Available | Positive | 2834983 - 2836449 | 53437.3 |
| formate dehydrogenase subunit alpha | C9Y90_13505 | Not Available | Positive | 2836647 - 2838794 | 79228.1 |
| sel1 repeat family protein | C9Y90_13510 | Not Available | Positive | 2838888 - 2839577 | 25080.4 |
| glutamate/aspartate:proton symporter gltp | C9Y90_13515 | Not Available | Negative | 2839768 - 2841081 | 47107.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





