Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | C9Y90_13420 | Not Available | Positive | 2819223 - 2819939 | 26563.4 |
| ribose 1,5-bisphosphokinase | C9Y90_13425 | Not Available | Positive | 2819939 - 2820496 | 20758.9 |
| protein phno | C9Y90_13430 | Not Available | Positive | 2820483 - 2820917 | 16570.8 |
| phosphonate metabolism protein phnp | C9Y90_13435 | Not Available | Positive | 2820919 - 2821677 | 27844.3 |
| protein yjdp | C9Y90_13440 | Not Available | Negative | 2821824 - 2822153 | 13469.4 |
| ribose 5-phosphate isomerase b | C9Y90_13445 | Not Available | Negative | 2822222 - 2822671 | 16074.3 |
| murr/rpir family transcriptional regulator | C9Y90_13450 | Not Available | Positive | 2823031 - 2823921 | 32364.1 |
| d-allose transporter substrate-binding protein | C9Y90_13455 | Not Available | Positive | 2823980 - 2824915 | 32939.8 |
| d-allose abc transporter atp-binding protein alsa | C9Y90_13460 | Not Available | Positive | 2825042 - 2826574 | 56807.4 |
| d-allose abc transporter permease | C9Y90_13465 | Not Available | Positive | 2826553 - 2827533 | 34317.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





