Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | C9Y90_13210 | Not Available | Positive | 2778927 - 2779553 | 23259.2 |
| murein hydrolase activator nlpd | C9Y90_13215 | Not Available | Positive | 2779693 - 2780832 | 40121.2 |
| rna polymerase sigma factor rpos | C9Y90_13220 | Not Available | Positive | 2780895 - 2781887 | 37975.1 |
| marr family transcriptional regulator | C9Y90_13225 | Not Available | Negative | 2782008 - 2782415 | 15460.9 |
| aromatic acid decarboxylase | C9Y90_13230 | Not Available | Positive | 2782562 - 2783155 | 21457.2 |
| ubid family decarboxylase | C9Y90_13235 | Not Available | Positive | 2783155 - 2784582 | 52341.8 |
| hypothetical protein | C9Y90_13240 | Not Available | Positive | 2784593 - 2784829 | 9208.12 |
| gntp family transporter | C9Y90_13245 | Not Available | Negative | 2784869 - 2786233 | 46767.6 |
| hpr family phosphocarrier protein | C9Y90_13250 | Not Available | Negative | 2786322 - 2787098 | 29293.6 |
| aldolase | C9Y90_13255 | Not Available | Negative | 2787103 - 2787741 | 23223.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





