Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose mutarotase | C9Y90_12895 | Not Available | Negative | 2709232 - 2709654 | 15474.0 |
| l-fuculokinase | C9Y90_12900 | Not Available | Negative | 2709656 - 2711074 | 52219.6 |
| l-fucose isomerase | C9Y90_12905 | Not Available | Negative | 2711183 - 2712958 | 64980.3 |
| l-fucose-proton symporter | C9Y90_12910 | Not Available | Negative | 2712991 - 2714307 | 47547.6 |
| l-fuculose-phosphate aldolase | C9Y90_12915 | Not Available | Positive | 2714854 - 2715501 | 23786.7 |
| lactaldehyde reductase | C9Y90_12920 | Not Available | Positive | 2715529 - 2716677 | 40515.7 |
| flap endonuclease xni | C9Y90_12925 | Not Available | Negative | 2716732 - 2717487 | 28167.7 |
| l-serine ammonia-lyase | C9Y90_12930 | Not Available | Negative | 2717599 - 2718966 | 48739.8 |
| serine transporter | C9Y90_12935 | Not Available | Negative | 2719024 - 2720313 | 46909.2 |
| log family protein ygdh | C9Y90_12940 | Not Available | Negative | 2720870 - 2722234 | 51003.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





