Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2701241 - 2701317 | Not Available |
| murein transglycosylase a | C9Y90_12850 | Not Available | Positive | 2701526 - 2702623 | 40412.9 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | C9Y90_12855 | Not Available | Positive | 2702700 - 2703506 | 28563.6 |
| sulfur acceptor protein csde | C9Y90_12860 | Not Available | Negative | 2703557 - 2704000 | 15897.1 |
| cysteine desulfurase csda | C9Y90_12865 | Not Available | Negative | 2704000 - 2705205 | 43322.7 |
| ygdi/ygdr family lipoprotein | C9Y90_12870 | Not Available | Positive | 2705397 - 2705624 | 8174.67 |
| glycine cleavage system transcriptional activator | C9Y90_12875 | Not Available | Positive | 2705975 - 2706892 | 34403.4 |
| duf423 domain-containing protein | C9Y90_12880 | Not Available | Positive | 2706911 - 2707306 | 14334.0 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | C9Y90_12885 | Not Available | Positive | 2707299 - 2708399 | 41921.5 |
| l-fucose operon activator | C9Y90_12890 | Not Available | Negative | 2708443 - 2709174 | 27363.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





