Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetraacyldisaccharide 4'-kinase | C9Y90_12540 | Not Available | Positive | 2634851 - 2635837 | 35595.3 |
| winged helix-turn-helix domain-containing protein | C9Y90_12545 | Not Available | Positive | 2635874 - 2637106 | 47670.6 |
| protein ycar | C9Y90_12550 | Not Available | Positive | 2637158 - 2637340 | 6855.35 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | C9Y90_12555 | Not Available | Positive | 2637337 - 2638083 | 27590.0 |
| hypothetical protein | C9Y90_12560 | Not Available | Positive | 2638237 - 2639130 | 34489.6 |
| envelope biogenesis factor elyc | C9Y90_12565 | Not Available | Negative | 2639107 - 2639886 | 28678.0 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | C9Y90_12570 | Not Available | Positive | 2640022 - 2640807 | 29816.0 |
| chromosome partition protein mukf | C9Y90_12575 | Not Available | Positive | 2640804 - 2642126 | 50581.7 |
| condensin subunit e | C9Y90_12580 | Not Available | Positive | 2642107 - 2642811 | 26976.1 |
| chromosome partition protein mukb | C9Y90_12585 | Not Available | Positive | 2642811 - 2647271 | 170211.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





