Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylsulfoxide reductase subunit b | C9Y90_12440 | Not Available | Positive | 2609900 - 2610517 | 22847.0 |
| dimethyl sulfoxide reductase subunit c | C9Y90_12445 | Not Available | Positive | 2610519 - 2611382 | 30828.2 |
| hydrolase | C9Y90_12450 | Not Available | Negative | 2611417 - 2612043 | 23119.6 |
| mfs transporter | C9Y90_12455 | Not Available | Positive | 2612357 - 2613505 | 41462.2 |
| inner membrane transporter ycam | C9Y90_12460 | Not Available | Positive | 2613715 - 2615145 | 52513.6 |
| lysr family transcriptional regulator | C9Y90_12465 | Not Available | Negative | 2615146 - 2616054 | 34260.3 |
| nad(p)h oxidoreductase | C9Y90_12470 | Not Available | Positive | 2616154 - 2616744 | 23020.4 |
| pyruvate formate lyase 1-activating protein | C9Y90_12475 | Not Available | Negative | 2616826 - 2617566 | 28205.9 |
| formate acetyltransferase 1 | C9Y90_12480 | Not Available | Negative | 2617758 - 2620040 | 85362.0 |
| formate transporter foca | C9Y90_12485 | Not Available | Negative | 2620095 - 2620952 | 30992.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





