Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1722 domain-containing protein | C9Y90_00010 | Not Available | Positive | 384 - 893 | 20232.3 |
| deoxyribodipyrimidine photo-lyase | C9Y90_00015 | Not Available | Positive | 890 - 2308 | 53693.9 |
| dipeptide permease d | C9Y90_00020 | Not Available | Negative | 2350 - 3831 | 54148.1 |
| nif3-like dinuclear metal center hexameric protein | C9Y90_00025 | Not Available | Positive | 4102 - 4845 | 26894.0 |
| 5-oxoprolinase subunit pxpb | C9Y90_00030 | Not Available | Positive | 4868 - 5524 | 23948.0 |
| 5-oxoprolinase/urea amidolyase family protein | C9Y90_00035 | Not Available | Positive | 5518 - 6450 | 34472.6 |
| 5-oxoprolinase subunit pxpa | C9Y90_00040 | Not Available | Positive | 6440 - 7174 | 25917.9 |
| endonuclease viii | C9Y90_00045 | Not Available | Positive | 7210 - 8001 | 29905.9 |
| abrb family transcriptional regulator | C9Y90_00050 | Not Available | Negative | 7998 - 9044 | 36820.0 |
| type 1 fimbrial protein | C9Y90_00055 | Not Available | Negative | 9196 - 10257 | 39538.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





