Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aquaporin z | C9Y90_12335 | Not Available | Negative | 2581959 - 2582654 | 23704.2 |
| atp-dependent endonuclease | C9Y90_12340 | Not Available | Positive | 2583080 - 2584738 | 63619.0 |
| duf535 domain-containing protein | C9Y90_12345 | Not Available | Negative | 2584735 - 2585727 | 38277.7 |
| maca family efflux pump subunit | C9Y90_12350 | Not Available | Positive | 2585842 - 2586957 | 40705.4 |
| macrolide abc transporter permease/atp-binding protein macb | C9Y90_12355 | Not Available | Positive | 2586954 - 2588900 | 70648.7 |
| cold-shock protein cspd | C9Y90_12360 | Not Available | Negative | 2588973 - 2589197 | 7969.41 |
| atp-dependent clp protease adapter clps | C9Y90_12365 | Not Available | Positive | 2589520 - 2589840 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | C9Y90_12370 | Not Available | Positive | 2589871 - 2592147 | 84211.9 |
| Trna-ser | Not Available | Not Available | Positive | 2592491 - 2592578 | Not Available |
| translation initiation factor if-1 | C9Y90_12385 | Not Available | Negative | 2592832 - 2593050 | 8250.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





