Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfolactaldehyde 3-reductase | C9Y90_12235 | Not Available | Negative | 2559559 - 2560437 | 30439.1 |
| sugar kinase | C9Y90_12240 | Not Available | Positive | 2560610 - 2561506 | 31708.6 |
| deor/glpr transcriptional regulator | C9Y90_12245 | Not Available | Positive | 2561546 - 2562334 | 28754.5 |
| translational gtpase typa | C9Y90_12250 | Not Available | Negative | 2562440 - 2564263 | 67359.5 |
| glutamate--ammonia ligase | C9Y90_12255 | Not Available | Positive | 2564660 - 2566045 | 51037.6 |
| two-component system sensor histidine kinase ntrb | C9Y90_12260 | Not Available | Positive | 2566219 - 2567268 | 38557.6 |
| nitrogen regulation protein nr(i) | C9Y90_12265 | Not Available | Positive | 2567280 - 2568689 | 52271.9 |
| hypothetical protein | C9Y90_12270 | Not Available | Positive | 2568794 - 2568904 | 3618.45 |
| coproporphyrinogen iii oxidase | C9Y90_12275 | Not Available | Negative | 2569094 - 2570467 | 52732.0 |
| der gtpase-activating protein yihi | C9Y90_12280 | Not Available | Negative | 2570656 - 2571165 | 19002.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





