Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent vitamin b12 receptor btub | C9Y90_11780 | Not Available | Negative | 2460313 - 2462157 | 68409.7 |
| trna (uridine(54)-c5)-methyltransferase trma | C9Y90_11785 | Not Available | Positive | 2462526 - 2463626 | 41969.3 |
| yijd family membrane protein | C9Y90_11790 | Not Available | Negative | 2463666 - 2464025 | 13024.3 |
| hth-type transcriptional repressor fabr | C9Y90_11795 | Not Available | Negative | 2464025 - 2464675 | 24502.5 |
| si-specific nad(p)(+) transhydrogenase | C9Y90_11800 | Not Available | Positive | 2464996 - 2466396 | 51563.4 |
| dna-binding transcriptional regulator oxyr | C9Y90_11805 | Not Available | Negative | 2466379 - 2467296 | 34278.0 |
| argininosuccinate lyase | C9Y90_11810 | Not Available | Negative | 2467563 - 2468936 | 50318.1 |
| acetylglutamate kinase | C9Y90_11815 | Not Available | Negative | 2468997 - 2469773 | 27161.3 |
| n-acetyl-gamma-glutamyl-phosphate reductase | C9Y90_11820 | Not Available | Negative | 2469781 - 2470785 | 35954.1 |
| acetylornithine deacetylase | C9Y90_11825 | Not Available | Positive | 2470939 - 2472090 | 42339.7 |
Pathways
775 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





