Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase large subunit | C9Y90_11570 | Not Available | Negative | 2416700 - 2418367 | 63370.1 |
| hydrogenase 4 subunit f | C9Y90_11575 | Not Available | Negative | 2418357 - 2419943 | 56706.6 |
| hydrogenase-4 component e | C9Y90_11580 | Not Available | Negative | 2419948 - 2420598 | 23334.9 |
| hydantoin racemase | C9Y90_11590 | Not Available | Negative | 2421729 - 2421839 | 4021.95 |
| hydrogenase 3 membrane subunit | C9Y90_11595 | Not Available | Negative | 2421856 - 2422803 | 34309.3 |
| 4fe-4s dicluster domain-containing protein | C9Y90_11605 | Not Available | Negative | 2424831 - 2425448 | 22234.6 |
| thioredoxin-dependent thiol peroxidase | C9Y90_11610 | Not Available | Negative | 2425701 - 2426171 | 17634.9 |
| glycine cleavage system transcriptional repressor | C9Y90_11615 | Not Available | Negative | 2426171 - 2426743 | 20769.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C9Y90_11620 | Not Available | Positive | 2426889 - 2427767 | 31285.9 |
| outer membrane protein assembly factor bamc | C9Y90_11625 | Not Available | Positive | 2427784 - 2428818 | 36844.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





