Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | C9Y90_11420 | Not Available | Positive | 2382577 - 2383731 | 43088.0 |
| cytoskeleton protein rodz | C9Y90_11425 | Not Available | Positive | 2384016 - 2385029 | 36174.5 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | C9Y90_11430 | Not Available | Positive | 2385056 - 2386174 | 40714.1 |
| histidine--trna ligase | C9Y90_11435 | Not Available | Positive | 2386285 - 2387559 | 47090.2 |
| ancillary secyeg translocon subunit | C9Y90_11440 | Not Available | Positive | 2387577 - 2388197 | 22177.2 |
| outer membrane protein assembly factor bamb | C9Y90_11445 | Not Available | Positive | 2388208 - 2389386 | 41903.6 |
| 50s ribosomal subunit stability factor | C9Y90_11450 | Not Available | Positive | 2389504 - 2390976 | 55039.1 |
| hypothetical protein | C9Y90_11455 | Not Available | Positive | 2391045 - 2391260 | 7959.67 |
| exodeoxyribonuclease vii large subunit | C9Y90_11460 | Not Available | Negative | 2391257 - 2392627 | 51863.4 |
| imp dehydrogenase | C9Y90_11465 | Not Available | Positive | 2392789 - 2394255 | 52025.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





