Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Bacteriophage accessory dna packaging protein | C9Y90_23990 | Not Available | Negative | 4819429 - 4819812 | 13925.3 |
| Bacteriophage major capsid protein | C9Y90_23995 | Not Available | Negative | 4819864 - 4820892 | 38499.7 |
| Bacteriophage head decoration protein | C9Y90_24000 | Not Available | Negative | 4820950 - 4821297 | 11997.2 |
| Bacteriophage prohead protease | C9Y90_24005 | Not Available | Negative | 4821334 - 4822839 | 52409.0 |
| Bacteriophage portal protein | C9Y90_24010 | Not Available | Negative | 4822829 - 4824421 | 59599.5 |
| Head-tail connector gpw | C9Y90_24015 | Not Available | Negative | 4824418 - 4824624 | 7674.37 |
| Dna packaging protein | C9Y90_24020 | Not Available | Negative | 4824608 - 4826536 | 72785.8 |
| Gp1 | C9Y90_24025 | Not Available | Negative | 4826508 - 4827014 | 19008.8 |
| Hypothetical protein | C9Y90_24030 | Not Available | Positive | 4827448 - 4827633 | 7063.55 |
| Tail component | C9Y90_24290 | Not Available | Negative | 4866976 - 4867303 | 11905.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





